| Protein: | gi|15222176 |
| Organism: | Arabidopsis thaliana |
| Length: | 1147 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222176.
| Description | E-value | Query Range |
Subject Range |
|
|
1109.0 | [0..1] | [1147..1] |
|
Region A: Residues: [1-349] |
1 11 21 31 41 51
| | | | | |
1 MAADELMPSH RSHRTPKSGP TARKKSELDK KKRGISVDKQ KNLKAFGVKS VVHAKKAKHH 60
61 AAEKEQKRLH LPKIDRNYGE APPFVVVVQG PPGVGKSLVI KSLVKEFTKQ NVPEVRGPIT 120
121 IVQGKQRRFQ FVECPNDINA MVDCAKVADL ALLVVDGSYG FEMETFEFLN IMQVHGFPRV 180
181 MGVLTHLDKF NDVKKLRKTK HHLKHRFWTE IYHGAKLFYL SGLIHGKYTP REVHNLARFV 240
241 IVIKPQPLTW RTAHPYVLVD RLEDVTPPEK VQMDKKCDRN ITVFGYLRGC NFKKRMKVHI 300
301 AGVGDFIVAG VTALTDPCPL PSAGKKKGLR DRDKLFYAPM SGIGDLVYD
|
| Detection Method: |  |
| Confidence: | 3.59 |
| Match: | 1s0uA |
| Description: | eIF2gamma apo |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.412582209182696 | bayes_pls_golite062009 |
|
Region A: Residues: [350-729] |
1 11 21 31 41 51
| | | | | |
1 KDAVYININS HQVQYSKTDD GKGEPTNKGK GRDVGEDLVK SLQNTKYSVD EKLDKTFINF 60
61 FGKKTSASSE TKLKAEDAYH SLPEGSDSES QSGDDEEDIV GNESEMKQET EIHGGRLRRK 120
121 AIFKTDLNED DFEEADDLEL DSYDPDTYDF EEADDAESDD NEVEDGGDDS ASDSADGEPG 180
181 DYQIDDKDSG NISQWKAPLK EIARKKNPNL MQIVYGASSL ATPLINENHD ISDDDESDDE 240
241 DFFKPKGEQH KNLGGGLDVG YVNSEDCSKF VNYGYLKNWK EKEVCESIRD RFTTGDWSKA 300
301 ALRDKNLGTG GEGEDDELYG DFEDLETGEK HKSHENLESG ANENEDEDAE VVERDGNNPR 360
361 SQADEPGYAD KLKEAQEITK
|
| Detection Method: | |
| Confidence: | 7.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [730-872] |
1 11 21 31 41 51
| | | | | |
1 QRNELEYNDL DEETRIELAG FRTGTYLRLE IHNVPYEMVE FFDPCHPILV GGIGFGEDNV 60
61 GYMQARLKKH RWHKKVLKTR DPIIVSIGWR RYQTIPVFAI EDRNGRHRML KYTPEHMHCL 120
121 ASFWGPLVPP NTGFVAFQNL SNN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [873-992] |
1 11 21 31 41 51
| | | | | |
1 QAGFRITATS VVLEFNHQAR IVKKIKLVGT PCKIKKKTAF IKDMFTSDLE IARFEGSSVR 60
61 TVSGIRGQVK KAGKNMLDNK AEEGIARCTF EDQIHMSDMV FLRAWTTVEV PQFYNPLTTA 120
121
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [993-1071] |
1 11 21 31 41 51
| | | | | |
1 LQPRDKTWNG MKTFGELRRE LNIPIPVNKD SLYKAIERKQ KKFNPLQIPK RLEKDLPFMS 60
61 KPKNIPKRKR PSLEDKRAV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1072-1147] |
1 11 21 31 41 51
| | | | | |
1 IMEPKERKEH TIIQQFQLLQ HHTMKKKKAT DQKKRKEYEA EKAKNEEINK KRRREERRDR 60
61 YREEDKQKKK TRRSLD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
