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Protein Overview: gi|89001055, gi|...

General Information:
Name(s) found: gi|89001055 [NCBI NR]
gi|15223574 [NCBI NR]
Description(s) found:
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  • gi|89001055|gb|ABD59117.1| At1g19540 [Arabidopsis thaliana] [NCBI NR]
  • gi|15223574|ref|NP_173385.1| isoflavone reductase, putative [Arabidopsis thaliana] [NCBI NR]
  • isoflavone reductase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | isoflavone reductase, putative | chr1:6765704-6767238 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g19540 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | NmrA-like negative transcriptional regulator family protein | chr1:6765713-6767247 FORWARD LENGTH=310 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g19540 OS=Arabidopsis thaliana GN=At1g19540 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metabolic process [IEA]
    regulation of nitrogen utilization [IEA]
    Molecular Function: catalytic activity [IEA]
    binding [IEA]
    transcription repressor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKILVIGA TGLIGKVLVE ESAKSGHATF ALVREASLSD PVKAQLVERF KDLGVTILYG  60
   61 SLSDKESLVK AIKQVDVVIS AVGRFQTEIL NQTNIIDAIK ESGNVKRFLP SEFGNDVDRT 120
  121 VAIEPTLSEF ITKAQIRRAI EAAKIPYTYV VSGCFAGLFV PCLGQCHLRL RSPPRDKVSI 180
  181 YDTGNGKAIV NTEEDIVAYT LKAVDDPRTL NKILYIHPPN YIVSQNDMVG LWEEKIGKTL 240
  241 EKTYVSEEEL LKTIQESKPP MDFLVGLIHT ILVKSDFTSF TIDPSFGVEA SELYPEVKYT 300
  301 SVDEFLNRFI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 52.0 Crystal structures of pinoresinol-lariciresinol and phenylcoumaran benzylic ether reductases, and their relationship to isoflavone reductases

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.35

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle