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View Structure Prediction Details

Protein: gi|89001055, gi|...
Organism: Arabidopsis thaliana
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|89001055, gi|....

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
233.0 [0..1] [307..1]

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Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKILVIGA TGLIGKVLVE ESAKSGHATF ALVREASLSD PVKAQLVERF KDLGVTILYG  60
   61 SLSDKESLVK AIKQVDVVIS AVGRFQTEIL NQTNIIDAIK ESGNVKRFLP SEFGNDVDRT 120
  121 VAIEPTLSEF ITKAQIRRAI EAAKIPYTYV VSGCFAGLFV PCLGQCHLRL RSPPRDKVSI 180
  181 YDTGNGKAIV NTEEDIVAYT LKAVDDPRTL NKILYIHPPN YIVSQNDMVG LWEEKIGKTL 240
  241 EKTYVSEEEL LKTIQESKPP MDFLVGLIHT ILVKSDFTSF TIDPSFGVEA SELYPEVKYT 300
  301 SVDEFLNRFI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.0
Match: 1qycA
Description: Crystal structures of pinoresinol-lariciresinol and phenylcoumaran benzylic ether reductases, and their relationship to isoflavone reductases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.26736023026862 bayes_pls_golite062009
oxidoreductase activity 0.68812524232244 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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