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Protein Overview: gi|15221982

General Information:
Name(s) found: gi|15221982 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|15221982|ref|NP_173360.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 769 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRFLKRKSP PPPDINLNEL PSDPAKRKSI LSYHPNQRDE VRREYLIRGP CQPRGHKFKQ  60
   61 IAIGKVLRRF NPKWFDLYGD WLEYSVEKEK AFCLYCYLFR DQTGNQGGSD SFLSTGFCSW 120
  121 NKADRLDQHV GLDVNSFHNN AKRKCEDLMR QGQSIKHALH KQTDVVKNDY RIWLNASIDV 180
  181 SRHLLHQGLP FRGHDESEES TNKGNFVELL KYTAGQNEVV KKVVLKNAPK NNQMTSPPIQ 240
  241 KDIVHCFSKE VTRSIIEEMD NDVFGLLVDE SADASDKEQM AVVFRFVDKY GVVKERFIGV 300
  301 IHVQETSSLS LKSAIDSLFA KYGLSLKKLR GQGYDGASNM KGEFNGLRSL ILKESSSAYY 360
  361 VHCFAHQLQL VVMAVAKKHV EVGEFFYMIS VLLNVVGASC KRKDKIREIH RQKVEEKISN 420
  421 GEIKTGTGLN QELSLQRPGN TRWGSHYKTL LRLEELFSSI VIVLEYIQDE GTDTTKRQQA 480
  481 YGILKYFHTF DFVFYLELML LVMGLTDSLS KALQRKDQDI LNAISLVKTT KCQLQKVRDD 540
  541 GWDAFMAKVS SFSEKNNTGM LKMEEEFVDS RRPRKKTGIT NLHHYKVDCF YTVLDMQLQE 600
  601 FNDRFDEVNS ELLICMSSLS PIDSFRQFDK SMLVRLTEFY PDDFSFVERR SLDHQLEIYL 660
  661 DNVKNDERFT DLKCLGDLAR VMVETRKHLS HPLVYRLLKV SLILPVATAT VERCFSAMNF 720
  721 VKTTLRNRIG DMFLSDCLVC FIEKQALNTV TNESVIKRFQ DMSERRVHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] MSA 5.287989 View MSA. No confident structure predictions are available.
    2 View Details [138..769] PSI-BLAST 38.045757 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.485910322334531 bayes_pls_golite062009
  • nuclease activity
    		•  0.318985867549147 bayes_pls_golite062009
  • hydrolase activity
    		•  0.278122673215692 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.251364069223802 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle