| Protein: | gi|15221982 |
| Organism: | Arabidopsis thaliana |
| Length: | 769 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221982.
| Description | E-value | Query Range |
Subject Range |
|
|
570.0 | [0..1] | [769..43] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MYRFLKRKSP PPPDINLNEL PSDPAKRKSI LSYHPNQRDE VRREYLIRGP CQPRGHKFKQ 60
61 IAIGKVLRRF NPKWFDLYGD WLEYSVEKEK AFCLYCYLFR DQTGNQGGSD SFLSTGFCSW 120
121 NKADRLDQHV GLDVNSF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [138-769] |
1 11 21 31 41 51
| | | | | |
1 HNNAKRKCED LMRQGQSIKH ALHKQTDVVK NDYRIWLNAS IDVSRHLLHQ GLPFRGHDES 60
61 EESTNKGNFV ELLKYTAGQN EVVKKVVLKN APKNNQMTSP PIQKDIVHCF SKEVTRSIIE 120
121 EMDNDVFGLL VDESADASDK EQMAVVFRFV DKYGVVKERF IGVIHVQETS SLSLKSAIDS 180
181 LFAKYGLSLK KLRGQGYDGA SNMKGEFNGL RSLILKESSS AYYVHCFAHQ LQLVVMAVAK 240
241 KHVEVGEFFY MISVLLNVVG ASCKRKDKIR EIHRQKVEEK ISNGEIKTGT GLNQELSLQR 300
301 PGNTRWGSHY KTLLRLEELF SSIVIVLEYI QDEGTDTTKR QQAYGILKYF HTFDFVFYLE 360
361 LMLLVMGLTD SLSKALQRKD QDILNAISLV KTTKCQLQKV RDDGWDAFMA KVSSFSEKNN 420
421 TGMLKMEEEF VDSRRPRKKT GITNLHHYKV DCFYTVLDMQ LQEFNDRFDE VNSELLICMS 480
481 SLSPIDSFRQ FDKSMLVRLT EFYPDDFSFV ERRSLDHQLE IYLDNVKNDE RFTDLKCLGD 540
541 LARVMVETRK HLSHPLVYRL LKVSLILPVA TATVERCFSA MNFVKTTLRN RIGDMFLSDC 600
601 LVCFIEKQAL NTVTNESVIK RFQDMSERRV HL
|
| Detection Method: | |
| Confidence: | 38.045757 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.485910322334531 | bayes_pls_golite062009 |
| nuclease activity | 0.318985867549147 | bayes_pls_golite062009 |
| hydrolase activity | 0.278122673215692 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.251364069223802 | bayes_pls_golite062009 |
