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Protein Overview: PTHC_ARATH

General Information:
Name(s) found: PTHC_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30685853|ref|NP_173279.2| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|134035412|sp|Q8GW64.2|PTHC_ARATH RecName: Full=Peptidyl-tRNA hydrolase, chloroplastic; AltName: Full=C-PTH; Flags: Precursor [NCBI NR]
  • Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2 [Swiss-Prot]
  • peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Peptidyl-tRNA hydrolase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | peptidyl-tRNA hydrolase family protein | chr1:6345987-6347679 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • aminoacyl-tRNA hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Peptidyl-tRNA hydrolase family protein | chr1:6345994-6347686 FORWARD LENGTH=288 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: aminoacyl-tRNA hydrolase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAVAFPAKI ANLSFPSNCC SLFFRSPATF LSPALPCRKL TKGIRGLEGL MSQCLSSSSQ  60
   61 SLSFSSNSFS SQPESELLQA LPSSKPKSPP LQLPWLIVGL GNPGKKYQGT RHNVGFEMVD 120
  121 ALADAEGISM NTVNFKALFG KGVIGNIPIM LAKPQTFMNL SGESVGQIVS FYKIPLKQVL 180
  181 VVYDDLDLPF GKLRLLPKGG HGGHNGMRSI IDRLKGSRDF PRLRIGIGRP PGKMDTANFV 240
  241 LRQFNRQEQE ELDHTFQTGL EAIRILLLEG FNKSATFVNT RKSMEQLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] deduced N/A No confident structure predictions are available.
    2 View Details [94..288] PSI-BLAST 69.045757 Structure of the Chloroplast Group II Intron Splicing Factor CRS2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle