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Protein Overview: gi|15223844

General Information:
Name(s) found: gi|15223844 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|15223844|ref|NP_172916.1| SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 735 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA processing [IEA][ISS]
    Molecular Function: RNA binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNSMKILPL EAPPADGNLG PLPPSQLTDE EIKENEFQGE QNNSIQTPIA VATHTNPIGI  60
   61 IYPPPEIRKI VETTAQFVSQ NGLAFGNKVK TEKANNANFS FLKSDNPYHG FYRYKVTEYS 120
  121 CHIRDGAQGT DVDDTEDPKL DDESDAKPDL QAQFRAPRKI LEAPEPEKYT VRLPEGIMEA 180
  181 ELDIIKHTAQ FVARNGQSFL RELMRREVNN SQFQFMKPTH SMFTFFTSLV DAYSEVLMPP 240
  241 RDLKEKLRKS VADLTTVLER CLNRLEWDRF QEEEKNKEED EKEKERVQMV MIDWKDFAVV 300
  301 ESIDFADEED KDLPMPMTLE EVIRRSKVSA MEEDEIVEPG KEVEMDMDEE EVKLVAEGMR 360
  361 AANLEEYVGS VEIEEEAPMR IVKNWKRPED RFLTERDSSK VVISRITGEL IPITEMSEHM 420
  421 RISLIDPKFK EQKDRMFAKI RETTLAQDDE IAKNIVGLAR LRPDIFGTTE EEVSNAVKAD 480
  481 IEKKDEQPKQ VIWDGHTGSI GRTANQALTQ NSNGEQGDGV YGDPNSFPGP AAFPPPRPGV 540
  541 PTVRPLPPPQ NLALNLPRPP PSVQYPGAPR PLGVPMMQPM YQQHQLSMSG PHGHPSMMMS 600
  601 RPPQMQPVMR VPPPPGSQFS HMQVPQPYGQ LPPLSMGMMQ PPPMAEMPPP PPPGEAPPPL 660
  661 PEEPEPKRQK LDESALVPED QFLAQHPGPA TIRVSKPNEN DGQVMEITVQ SLSENVGSLK 720
  721 EKIAGEMQIP ANKQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] PSI-BLAST 23.0 No description for 2dt6A was found.
    2 View Details [139..252] PSI-BLAST 29.045757 No description for 2dt7B was found.
    3 View Details [253..445] MSA 1.142979 View MSA. No confident structure predictions are available.
    4 View Details [446..735] PSI-BLAST 7.0 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle