YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15237696

General Information:
Name(s) found: gi|15237696 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|15237696|ref|NP_196058.1| S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] [NCBI NR]
  • S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 S-adenosyl-L-methionine:carboxyl methyltransferase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | chr5:1234884-1236318 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:1234883-1236317 FORWARD LENGTH=385 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • S-adenosyl-L-methionine-dependent methyltransferase-like protein OS=Arabidopsis thaliana GN=At5g04380 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to cadmium ion [IEP]
    Molecular Function: methyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLCLILCRC DCKSEYKVDE ERSSKYPFVG ALCMNGGDVD NSYTTKSLLQ KRVLSITNPI  60
   61 LVKNTEEMLT NLDFPKCIKV ADLGCSSGQN TFLAMSEIVN TINVLCQKWN QSRPEIDCCL 120
  121 NDLPTNDFNT TFKFITFFNK KLTSNGSCFV SGVPGSFYSR LFPRKSLHFI YSIYSIHFLS 180
  181 KVPDGLEKNK MSVYITSSSP LSEYKAYLNQ FKRDFTTFLR MRSEEMVHNG RMVLTLIGRN 240
  241 TLDNPLYRDC CHCWTLLSNS LRDLVFEGLL SASKVYSFKM PFYDPNEEEV KEIIRNEGSF 300
  301 QINDLEMHEF DLGHSKEKCS LQSHKAKAGQ KEASCIRAVT ETMLVAHFGD DIIDALFHKY 360
  361 AHHVSQHASC RVKTSVTLIV SLVRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..385] PSI-BLAST 144.0 CRYSTAL STRUCTURE OF SALICYLIC ACID CARBOXYL METHYLTRANSFERASE (SAMT)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle