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View Structure Prediction Details

Protein: gi|15237696
Organism: Arabidopsis thaliana
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237696.

Description E-value Query
Range
Subject
Range
gi|58201458 - gi|58201458|gb|AAW66850.1| SAMT [Nicotiana tabacum]
546.0 [0..26] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLCLILCRC DCKSEYKVDE ERSSKYPFVG ALCMNGGDVD NSYTTKSLLQ KRVLSITNPI  60
   61 LVKNTEEMLT NLDFPKCIKV ADLGCSSGQN TFLAMSEIVN TINVLCQKWN QSRPEIDCCL 120
  121 NDLPTNDFNT TFKFITFFNK KLTSNGSCFV SGVPGSFYSR LFPRKSLHFI YSIYSIHFLS 180
  181 KVPDGLEKNK MSVYITSSSP LSEYKAYLNQ FKRDFTTFLR MRSEEMVHNG RMVLTLIGRN 240
  241 TLDNPLYRDC CHCWTLLSNS LRDLVFEGLL SASKVYSFKM PFYDPNEEEV KEIIRNEGSF 300
  301 QINDLEMHEF DLGHSKEKCS LQSHKAKAGQ KEASCIRAVT ETMLVAHFGD DIIDALFHKY 360
  361 AHHVSQHASC RVKTSVTLIV SLVRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 144.0
Match: 1m6eX
Description: CRYSTAL STRUCTURE OF SALICYLIC ACID CARBOXYL METHYLTRANSFERASE (SAMT)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle