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Protein Overview: LISC_ARATH

General Information:
Name(s) found: LISC_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Lipoyl synthase, chloroplastic OS=Arabidopsis thaliana GN=LIP1P PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: metabolic process [IEA]
    lipoic acid biosynthetic process [ISS]
    lipoate biosynthetic process [IEA]
    Molecular Function: lipoic acid synthase activity [ISS]
    catalytic activity [IEA]
    lipoate synthase activity [IEA]
    iron-sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHHCSITKP TFSISISTQK LHHHSSKFLN LGFRIRCESG DVSSPLRTKA VSLSSEMEDS  60
   61 SSLKKSLMEL EGKKSEPYPG GMPKMGPFTG RDPNVKKPAW LRQKAPQGER FQEVKESLSR 120
  121 LNLNTVCEEA QCPNIGECWN GGGDGVATAT IMVLGDTCTR GCRFCAVKTS RNPPPPDPME 180
  181 PENTAKAIAS WGVDYIVITS VDRDDIPDGG SGHFAQTVKA MKRHKPDIMI ECLTSDFRGD 240
  241 LEAVDTLVHS GLDVFAHNVE TVKRLQRLVR DPRAGYEQSM SVLKHAKISK PGMITKTSIM 300
  301 LGLGETDEEL KEAMADLRAI DVDILTLGQY LQPTPLHLTV KEYVTPEKFD FWKTYGESIG 360
  361 FRYVASGPLV RSSYRAGELF VKTMVKESYS KSLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] MSA 2.754996 View MSA. No confident structure predictions are available.
    2 View Details [97..394] PSI-BLAST 40.39794 The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • biotin synthase activity
    		•  2.22585029668171 bayes_pls_golite062009
  • radical SAM enzyme activity
    		•  2.08127882819276 bayes_pls_golite062009
  • catalytic activity
    		•  1.85375915825216 bayes_pls_golite062009
  • coproporphyrinogen oxidase activity
    		•  1.27516985221578 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  1.26112752511053 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  0.604275066192139 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  0.35292941647096 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle