| Protein: | LISC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 394 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LISC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..2] | [394..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MMHHCSITKP TFSISISTQK LHHHSSKFLN LGFRIRCESG DVSSPLRTKA VSLSSEMEDS 60
61 SSLKKSLMEL EGKKSEPYPG GMPKMGPFTG RDPNVK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-394] |
1 11 21 31 41 51
| | | | | |
1 KPAWLRQKAP QGERFQEVKE SLSRLNLNTV CEEAQCPNIG ECWNGGGDGV ATATIMVLGD 60
61 TCTRGCRFCA VKTSRNPPPP DPMEPENTAK AIASWGVDYI VITSVDRDDI PDGGSGHFAQ 120
121 TVKAMKRHKP DIMIECLTSD FRGDLEAVDT LVHSGLDVFA HNVETVKRLQ RLVRDPRAGY 180
181 EQSMSVLKHA KISKPGMITK TSIMLGLGET DEELKEAMAD LRAIDVDILT LGQYLQPTPL 240
241 HLTVKEYVTP EKFDFWKTYG ESIGFRYVAS GPLVRSSYRA GELFVKTMVK ESYSKSLS
|
| Detection Method: | |
| Confidence: | 40.39794 |
| Match: | 1r30A |
| Description: | The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| biotin synthase activity | 2.22585029668171 | bayes_pls_golite062009 |
| radical SAM enzyme activity | 2.08127882819276 | bayes_pls_golite062009 |
| catalytic activity | 1.85375915825216 | bayes_pls_golite062009 |
| coproporphyrinogen oxidase activity | 1.27516985221578 | bayes_pls_golite062009 |
| sulfurtransferase activity | 1.26112752511053 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | 0.604275066192139 | bayes_pls_golite062009 |
| transferase activity, transferring sulfur-containing groups | 0.35292941647096 | bayes_pls_golite062009 |
