YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|18422896, gi|...

General Information:
Name(s) found: gi|57222126 [NCBI NR]
gi|56236130 [NCBI NR]
gi|18422896 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|57222126|gb|AAW38970.1| At5g48290 [Arabidopsis thaliana] [NCBI NR]
  • gi|56236130|gb|AAV84521.1| At5g48290 [Arabidopsis thaliana] [NCBI NR]
  • gi|18422896|ref|NP_568695.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Heavy-metal-associated domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | heavy-metal-associated domain-containing protein | chr5:19586206-19586884 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g48290 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • metal ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Heavy metal transport/detoxification superfamily protein | chr5:19568980-19569658 FORWARD LENGTH=181 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g48290 OS=Arabidopsis thaliana GN=At5g48290 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 181 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metal ion transport [IEA]
    Molecular Function: metal ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKILIRVT MTDDKTRAKA MTKAVQFKGV SAVEIKGDHR NQIEVTGVEV DMIPLIQILR  60
   61 KKVAFAELVS VTKVEPPKKE DEKKGGDGKG AEGKGGDQKG GDKKGPDDKE PPEPKPVPCY 120
  121 PWPLQGYGVP SSFPHQGYGV PSTFPQGDGV PSSFPYPCHP AHPYNDIGEP VYNHEPNCKI 180
  181 M

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] PSI-BLAST 7.69897 No description for 2gcfA was found.
    2 View Details [76..181] MSA 3.041995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle