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View Structure Prediction Details

Protein: gi|18422896, gi|...
Organism: Arabidopsis thaliana
Length: 181 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18422896, gi|....

Description E-value Query
Range
Subject
Range
gi|27754556 - gi|27754556|gb|AAO22725.1| unknown protein [Arabidopsis thaliana]
152.0 [0..1] [181..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKILIRVT MTDDKTRAKA MTKAVQFKGV SAVEIKGDHR NQIEVTGVEV DMIPLIQILR  60
   61 KKVAFAELVS VTKVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2gcfA
Description: No description for 2gcfA was found.

Predicted Domain #2
Region A:
Residues: [76-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPKKEDEKKG GDGKGAEGKG GDQKGGDKKG PDDKEPPEPK PVPCYPWPLQ GYGVPSSFPH  60
   61 QGYGVPSTFP QGDGVPSSFP YPCHPAHPYN DIGEPVYNHE PNCKIM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle