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Protein Overview: BARS_ARATH

General Information:
Name(s) found: BARS_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|254810224|sp|Q4KSH9.2|BARS_ARATH RecName: Full=Alpha-barbatene synthase; Short=AtBS [NCBI NR]
  • gi|15241542|ref|NP_199276.1| terpene synthase/cyclase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|126352284|gb|ABO09887.1| At5g44630 [Arabidopsis thaliana] [NCBI NR]
  • Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2 [Swiss-Prot]
  • terpene synthase/cyclase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | terpene synthase/cyclase family protein | chr5:18020507-18022843 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr5:18003280-18005616 FORWARD LENGTH=557 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sesquiterpenoid biosynthetic process [IDA]
    sesquiterpene biosynthetic process [IDA]
    Molecular Function: magnesium ion binding [IEA]
    lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALGNFDYE SYTNFTKLPS SQWGDQFLKF SIADSDFDVL EREIEVLKPK VRENIFVSSS  60
   61 TDKDAMKKTI LSIHFLDSLG LSYHFEKEIE ESLKHAFEKI EDLIADENKL HTISTIFRVF 120
  121 RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH 180
  181 LESLATGRRA SPPHISKLIQ NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN 240
  241 FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA 300
  301 KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE 360
  361 ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF DEYIESGGAE IGTYATIACS 420
  421 IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG 480
  481 VTKEEASREL EKMNGDMNKI VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE 540
  541 GKLKEYMRLL LVDPILL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..557] PSI-BLAST 1000.0 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.87397377711135 bayes_pls_golite062009
  • transferase activity
    		•  1.34929557841705 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.22586398285056 bayes_pls_golite062009
  • prenyltransferase activity
    		•  0.302854173865421 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle