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View Structure Prediction Details

Protein: BARS_ARATH
Organism: Arabidopsis thaliana
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BARS_ARATH.

Description E-value Query
Range
Subject
Range
TPSGD_VITVI - (-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1
696.0 [0..6] [557..15]

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Predicted Domain #1
Region A:
Residues: [1-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALGNFDYE SYTNFTKLPS SQWGDQFLKF SIADSDFDVL EREIEVLKPK VRENIFVSSS  60
   61 TDKDAMKKTI LSIHFLDSLG LSYHFEKEIE ESLKHAFEKI EDLIADENKL HTISTIFRVF 120
  121 RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH 180
  181 LESLATGRRA SPPHISKLIQ NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN 240
  241 FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA 300
  301 KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE 360
  361 ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF DEYIESGGAE IGTYATIACS 420
  421 IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG 480
  481 VTKEEASREL EKMNGDMNKI VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE 540
  541 GKLKEYMRLL LVDPILL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 5eauA
Description: 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.87397377711135 bayes_pls_golite062009
transferase activity 1.34929557841705 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 1.22586398285056 bayes_pls_golite062009
prenyltransferase activity 0.302854173865421 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle