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Protein Overview: YSL4_ARATH

General Information:
Name(s) found: YSL4_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 670 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: oligopeptide transport [ISS]
    Molecular Function: oligopeptide transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEIPRSTE ISETLLLPET NLDHGEYVPE WKEQITIRGL ISSALLGILF CIITHKLNLT  60
   61 IGIIPSLNVA AGLLGFFFIK SWTGFLSKLG FLSKPFTKQE NTVIQTCVVS CYGLAYSGGF 120
  121 GSYLIAMDER TYKLIGSDYP GNNPEDVINP GLWWMTGFLF VVSFLGLFCL VPLRKVMILD 180
  181 YKLTYPSGTA TAMLINSFHN NTGAELAGKQ VKCLGKYLSL SLVWSCFKWF FSGIGGACGF 240
  241 DHFPTLGLTL FKNTFYFDFS PTFIGCGMIC PHLVNCSVLL GAIISWGFLW PFISQHAGDW 300
  301 YPADLKANDF KGLYGYKVFI AISIILGDGL YNLIKIIVVT VKEICNKSSR QHNLPVFTDI 360
  361 LDKSKTSVLM REKKKRDIIF LKDRIPLEFA VSGYVGLAAI STAIIPLIFP PLKWYFVLCS 420
  421 YLVAPGLAFC NSYGAGLTDM SMPSTYGKTG LFIVASIVGN NGGVIAGLAA CGIMMSIVST 480
  481 AADLMQDFKT GYLTLSSAKS MFVTQLLGTA MGCIIAPLTF WLFWTAFDIG DPDGLYKAPY 540
  541 AVIYREMAIL GVEGFAKLPK HCLALCCGFF IAALIVNLIR DMTPPKISKL IPLPMAMAGP 600
  601 FYIGAYFAID MFVGTVIMLV WERMNKKDAD DYSGAVASGL ICGDGIWTIP SAILSILRIN 660
  661 PPICMYFRPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] MSA 2.176994 View MSA. No confident structure predictions are available.
    2 View Details [200..360] deduced N/A No confident structure predictions are available.
    3 View Details [361..520] MSA 1.202989 View MSA. No confident structure predictions are available.
    4 View Details [521..670] MSA 4.195994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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