YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HPSE3_ARATH

General Information:
Name(s) found: HPSE3_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • Heparanase-like protein 3 OS=Arabidopsis thaliana GN=At5g34940 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: plant-type cell wall [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: beta-glucuronidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRQILAIV LFLCVFQFLD CTVSSAVEEN GTVFVYGRAA VGTIDEDFIC ATLDWWPPEK  60
   61 CDYGSCSWDH ASILNLDLNN VILQNAIKAF APLKIRIGGT LQDIVIYETP DSKQPCLPFT 120
  121 KNSSILFGYT QGCLPMRRWD ELNAFFRKTG TKVIFGLNAL SGRSIKSNGE AIGAWNYTNA 180
  181 ESFIRFTAEN NYTIDGWELG NELCGSGVGA RVGANQYAID TINLRNIVNR VYKNVSPMPL 240
  241 VIGPGGFFEV DWFTEYLNKA ENSLNATTRH IYDLGPGVDE HLIEKILNPS YLDQEAKSFR 300
  301 SLKNIIKNSS TKAVAWVGES GGAYNSGRNL VSNAFVYSFW YLDQLGMASL YDTKTYCRQS 360
  361 LIGGNYGLLN TTNFTPNPDY YSALIWRQLM GRKALFTTFS GTKKIRSYTH CARQSKGITV 420
  421 LLMNLDNTTT VVAKVELNNS FSLRHTKHMK SYKRASSQLF GGPNGVIQRE EYHLTAKDGN 480
  481 LHSQTMLLNG NALQVNSMGD LPPIEPIHIN STEPITIAPY SIVFVHMRNV VVPACA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..536] PSI-BLAST 90.0 Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from Geobacillus stearothermophilus T6

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.45970250704228 bayes_pls_golite062009
  • hydrolase activity
    		•  0.903629100850133 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.841019758939022 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.376183660552729 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle