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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HPSE3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRQILAIV LFLCVFQFLD CTVSSAVEEN GTVFVYGRAA VGTIDEDFIC ATLDWWPPEK  60
   61 CDYGSCSWDH ASILNLDLNN VILQNAIKAF APLKIRIGGT LQDIVIYETP DSKQPCLPFT 120
  121 KNSSILFGYT QGCLPMRRWD ELNAFFRKTG TKVIFGLNAL SGRSIKSNGE AIGAWNYTNA 180
  181 ESFIRFTAEN NYTIDGWELG NELCGSGVGA RVGANQYAID TINLRNIVNR VYKNVSPMPL 240
  241 VIGPGGFFEV DWFTEYLNKA ENSLNATTRH IYDLGPGVDE HLIEKILNPS YLDQEAKSFR 300
  301 SLKNIIKNSS TKAVAWVGES GGAYNSGRNL VSNAFVYSFW YLDQLGMASL YDTKTYCRQS 360
  361 LIGGNYGLLN TTNFTPNPDY YSALIWRQLM GRKALFTTFS GTKKIRSYTH CARQSKGITV 420
  421 LLMNLDNTTT VVAKVELNNS FSLRHTKHMK SYKRASSQLF GGPNGVIQRE EYHLTAKDGN 480
  481 LHSQTMLLNG NALQVNSMGD LPPIEPIHIN STEPITIAPY SIVFVHMRNV VVPACA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle