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Protein Overview: RS212_ARATH

General Information:
Name(s) found: RS212_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15241026|ref|NP_198122.1| 40S ribosomal protein S21 (RPS21C) [Arabidopsis thaliana] [NCBI NR]
  • gi|117168167|gb|ABK32166.1| At5g27700 [Arabidopsis thaliana] [NCBI NR]
  • gi|115502822|sp|Q3E902.1|RS212_ARATH RecName: Full=40S ribosomal protein S21-2 [NCBI NR]
  • 40S ribosomal protein S21-2 OS=Arabidopsis thaliana GN=RPS21C PE=3 SV=1 [Swiss-Prot]
  • 40S ribosomal protein S21 (RPS21C) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 40S ribosomal protein S21 (RPS21C), ribosomal protein S21, Zea mays, PIR:T03945 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 40S ribosomal protein S21 (RPS21C) | chr5:9807536-9808052 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 40S ribosomal protein S21-2 [nr-271106-contam.fasta]
  • At5g27700 [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 85 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [IDA]
    ribosome [ISS]
    Biological Process: ribosome biogenesis [ISS]
    translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNEEGQVTE LYIPRKCSAT NRLITSKDHA SVQLNIGHLD ANGLYTGQFT TFALCGFVRA  60
   61 QGDADSGVDR LWQKKKVEAK QKLRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] Pfam 51.522879 No description for PF01249.9 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle