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Protein Overview: EDL17_ARATH

General Information:
Name(s) found: EDL17_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    integral to membrane [IEA]
    Biological Process: response to nematode [IEP]
    Molecular Function: carbohydrate transmembrane transporter activity [ISS]
    sugar:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMEEGRSIE EGLLQLKNKN DDSECRITAC VILSTFVAVC GSFSFGVATG YTSGAETGVM  60
   61 KDLDLSIAQF SAFGSFATLG AAIGALFCGN LAMVIGRRGT MWVSDFLCIT GWLSIAFAKE 120
  121 VVLLNFGRII SGIGFGLTSY VVPVYIAEIT PKHVRGTFTF SNQLLQNAGL AMIYFCGNFI 180
  181 TWRTLALLGA LPCFIQVIGL FFVPESPRWL AKVGSDKELE NSLFRLRGRD ADISREASEI 240
  241 QVMTKMVEND SKSSFSDLFQ RKYRYTLVVG IGLMLIQQFS GSAAVISYAS TIFRKAGFSV 300
  301 AIGTTMLGIF VIPKAMIGLI LVDKWGRRPL LMTSAFGMSM TCMLLGVAFT LQKMQLLSEL 360
  361 TPILSFICVM MYIATYAIGL GGLPWVIMSE IFPINIKVTA GSIVTLVSFS SSSIVTYAFN 420
  421 FLFEWSTQGT FFIFAGIGGA ALLFIWLLVP ETKGLSLEEI QVSLIHQPDE RNQT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..474] PSI-BLAST 26.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.29248638217469 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.29248638217469 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  1.6904339767429 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.46605775041083 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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