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Protein Overview: gi|30689405

General Information:
Name(s) found: gi|30689405 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30689405|ref|NP_197820.2| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 698 amino acids

    Gene Ontology:
    Cellular Component: heterotrimeric G-protein complex [ISS]
    Biological Process: signal transduction [ISS]
    Molecular Function: signal transducer activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLIEEEEE SRFFDAHEEI ASCSSPCKIE SPSSISGEFR YDVWIKSPGN TEERREKFLK  60
   61 WMGLSSTVNE SKSGNVYRLS SSVNESAVLM SLKSDDDEFS SSRCDSFSPS ESVDRVVNES 120
  121 LCKEEGEVDS GMVLRNLGFV DDGDISSSLC SLSSSPVSDK IVKEHGEPKL LPDPMVAEEE 180
  181 REVSGIMKRV KEKWLSRLYK VRNKRSAGGD DNGGEVAVCG SRIERVKVKE YKKEAKELSA 240
  241 LFKGQEIQAH EGAILAMKFS PDGRYLASAG EDGVLRVWSV VEDERCEEHD VPKIDPSCIY 300
  301 FEVSKLSELR PVAVEKDGIT GSLMSPRKTT ESACVIIPPK IFRVLDKPLH EFLGHSGDIL 360
  361 DISWSKNNRL LSASVDNSVR LWQIGCEDCL GIFSHNNYVT SVQFNPVDDD HFISGSIDGK 420
  421 VRIWSASQCQ VVDWADARGI VTAVCYQPDG QAVIIGTLTS DCRFYNVSGH CLQLDGHICL 480
  481 HNKKKSSNKR IIGFQFLLQF DSTDPSRVMV ASADSQVRII SGRNVVHKYK GSRNAGNQIS 540
  541 ASFTADGKHI VSACDDSSVY VWNCVGHDPE QSSPGFFSHT KRLKIRSFEK FSADVSVAIP 600
  601 WCGFTPVLSG GSELSPSLFS LGREYVLDSP KGSATWPEEK LASSFSPVKA IRRSHYKFLR 660
  661 SSCRRTSESS HLWGLVIVTG GWDGRIKLFH NYGLPVPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..502] PSI-BLAST 9.09691 Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2
    2 View Details [503..579] PSI-BLAST 55.69897 Tup1, C-terminal domain
    3 View Details [580..698] PSI-BLAST 57.69897 No description for 2ovpB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.208111367364858 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle