| Protein: | gi|30689405 |
| Organism: | Arabidopsis thaliana |
| Length: | 698 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30689405.
| Description | E-value | Query Range |
Subject Range |
|
|
616.0 | [0..6] | [695..767] |
|
Region A: Residues: [1-502] |
1 11 21 31 41 51
| | | | | |
1 MESLIEEEEE SRFFDAHEEI ASCSSPCKIE SPSSISGEFR YDVWIKSPGN TEERREKFLK 60
61 WMGLSSTVNE SKSGNVYRLS SSVNESAVLM SLKSDDDEFS SSRCDSFSPS ESVDRVVNES 120
121 LCKEEGEVDS GMVLRNLGFV DDGDISSSLC SLSSSPVSDK IVKEHGEPKL LPDPMVAEEE 180
181 REVSGIMKRV KEKWLSRLYK VRNKRSAGGD DNGGEVAVCG SRIERVKVKE YKKEAKELSA 240
241 LFKGQEIQAH EGAILAMKFS PDGRYLASAG EDGVLRVWSV VEDERCEEHD VPKIDPSCIY 300
301 FEVSKLSELR PVAVEKDGIT GSLMSPRKTT ESACVIIPPK IFRVLDKPLH EFLGHSGDIL 360
361 DISWSKNNRL LSASVDNSVR LWQIGCEDCL GIFSHNNYVT SVQFNPVDDD HFISGSIDGK 420
421 VRIWSASQCQ VVDWADARGI VTAVCYQPDG QAVIIGTLTS DCRFYNVSGH CLQLDGHICL 480
481 HNKKKSSNKR IIGFQFLLQF DS
|
| Detection Method: |  |
| Confidence: | 9.09691 |
| Match: | 1k32A |
| Description: | Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.208111367364858 | bayes_pls_golite062009 |
|
Region A: Residues: [503-579] |
1 11 21 31 41 51
| | | | | |
1 TDPSRVMVAS ADSQVRIISG RNVVHKYKGS RNAGNQISAS FTADGKHIVS ACDDSSVYVW 60
61 NCVGHDPEQS SPGFFSH
|
| Detection Method: | |
| Confidence: | 55.69897 |
| Match: | 1erjA |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [580-698] |
1 11 21 31 41 51
| | | | | |
1 TKRLKIRSFE KFSADVSVAI PWCGFTPVLS GGSELSPSLF SLGREYVLDS PKGSATWPEE 60
61 KLASSFSPVK AIRRSHYKFL RSSCRRTSES SHLWGLVIVT GGWDGRIKLF HNYGLPVPV
|
| Detection Method: | |
| Confidence: | 57.69897 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
