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Protein Overview: gi|110743777, gi...

General Information:
Name(s) found: gi|30688719 [NCBI NR]
gi|110743777 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30688719|ref|NP_197680.2| zinc finger (C2H2 type) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110743777|dbj|BAE99724.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 373 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of transcription [TAS]
    response to chitin [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIHMMNRDE HIAKKVEGSI SSFSGETSTS SKQIYVNPVT TTGTKSMEDD DVSLSLLYNL  60
   61 STLHEKVHQI QSLVSFYMVS TNNINQSSGS TSLAVANIGS LVQEIITAAS SMLYTCQQLQ 120
  121 IGSNNNNNDI DNDQTVDAMV LEFSRQETDP GHDFVQESTN LFGVQERGQI SFPDQNLDWY 180
  181 NTETINPKKD KHRSKPSSGS YDILELDVAD LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG 240
  241 DEYKTREALI SPTSQDKKGG YSLKKHYYSC PQHGCRWNQR HEKFQPLKSV ICAKNHYKRS 300
  301 HCPKMYMCRR CSVKHFSVLS DLRTHEKHCG DIKWVCSCGT KFSRKDKLMS HVSLFLGHVP 360
  361 AHGSSKPPTI TLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 52.30103 No description for 2i13A was found.
    2 View Details [190..254] PSI-BLAST 18.69897 Ying-yang 1 (yy1, zinc finger domain)
    3 View Details [255..373] FFAS03 5.65 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle