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Protein Overview: BPM5_ARATH

General Information:
Name(s) found: BPM5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15242126|ref|NP_197600.1| ATBPM5 (BTB-POZ and MATH domain 5); protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|109134137|gb|ABG25067.1| At5g21010 [Arabidopsis thaliana] [NCBI NR]
  • BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana GN=BPM5 PE=1 SV=1 [Swiss-Prot]
  • speckle-type POZ protein-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Speckle-type POZ protein-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATBPM5 | ATBPM5 (BTB-POZ AND MATH DOMAIN 5); protein binding | chr5:7136064-7138376 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g21010 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATBPM5; protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATBPM5, BPM5 | BTB-POZ and MATH domain 5 | chr5:7136062-7138374 FORWARD LENGTH=410 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 410 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytosol [IDA]
    Biological Process: cellular response to salt stress [IEP]
    response to osmotic stress [IEP]
    cellular response to water deprivation [IEP]
    Molecular Function: protein binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESVIQGSN PDRVLSPTSS KSVTQTVNGS HQFVIQGYSL AKGMGIGKHI ASDNFSVGGY  60
   61 QWGIFFYPDG KNPEDNSSYV SVFIALASEG TEVRALFELA LVDQSGKGKH KVHSHFERSL 120
  121 DGGPYTLKYR GSMWGYKRFF RRSILETSDY LKDDCLIINC TVGVVVSEIL CPQLHSVHVP 180
  181 DSELGSHFGV LLDSMEGSDI TFNIAGEKFL AHKLVLAARS PFFKSKFFSE FEANNTEVTI 240
  241 NDLEPKVFKA LLQFMYKDSL PEDVEPATAH TFERLKLSEI YETLIVKVLA AADKYDLIRL 300
  301 RLLCESHICK GVSVKSVAKI LALADRYNAK ELKGVCLKFT AENLAAVLET DAYQQMKDEC 360
  361 VTLQSELLKA VAGHEEGSNS TGGAKSQSVW AQLSDGGGDT TSRHVRQRTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] PSI-BLAST 9.39794 Crystal structure of HAUSP
    2 View Details [341..410] PSI-BLAST 9.69897 No description for 2eqxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle