YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15242078

General Information:
Name(s) found: gi|15242078 [NCBI NR]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • gi|15242078|ref|NP_197587.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: anchored to membrane [TAS]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSHDTYQKL ILFCLSIFFL QNILKNVEGL ACNWGTQASH PLPPNIVVKL LRDNGFNKVK  60
   61 LFEADPGALR ALGKSGIQVM VGIPNDLLAT MASTVTNAEL WVQQNVSQYI SRYGTDIRYV 120
  121 AVGNEPFLKT YNNRFVRSTY PALQNVQAAL VKAGLGRQVK VTVPLNADVY ESSDGLPSSG 180
  181 DFRSDIKTLM ISIVRFLADS VSPITFNIYP FLSLNADPNF PREYAFFPNG GGGGGAKPVV 240
  241 DGSISYTNVF DANFDTLVSA LEKNGFDANK IEIIVGEVGW PTDGDQNANP AMAQRFNQGL 300
  301 LNRILQGQGT PRRRMAPEVY IFSLVDEDAK SIDPGKFERH WGIFSYDGAV KYPLSLGNGR 360
  361 PLVPTKGVRY QAREWCVLST QAAGNGAATW QASATYACQN ADCTSLGPGS SCAALDPTAN 420
  421 ASYAFNMYFQ KMDHRRGSCD FNNLGVVTKI DPSSGSCRFP IEIDTSRQQM SNPPPRNSGA 480
  481 SEAKYRLGAA VVMVICLVFS N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..359] PSI-BLAST 86.221849 Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
    2 View Details [360..501] Pfam 29.69897 No description for PF07983.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle