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Protein Overview: CHR17_ARATH

General Information:
Name(s) found: CHR17_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • ISWI chromatin-remodeling complex ATPase CHR17 OS=Arabidopsis thaliana GN=CHR17 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1069 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARASKREVS SDEAYSSEEE EQVNDQANVE EDDDELEAVA RSAGSDEEDV APDEAPVSDD  60
   61 EVVPVEDDAE EDEEDEEKAE ISKREKARLK EMQKMKKQKI QQILDSQNAS IDADMNNKGK 120
  121 GRIKYLLQQT ELFAHFAKSD PSPSQKKGKG RGRHSSKLTE EEEDEECLKE EEGGIVGSGG 180
  181 TRLLTQPACI QGKLRDYQLA GLNWLIRLYE NGINGILADE MGLGKTLQTI SLLAYLHEYR 240
  241 GINGPHMVVA PKSTLGNWMN EIRRFCPVLR AVKFLGNPEE RRHIREELLV AGKFDICVTS 300
  301 FEMAIKEKTT LRRFSWRYII IDEAHRIKNE NSLLSKTMRL FSTNYRLLIT GTPLQNNLHE 360
  361 LWALLNFLLP EVFSSAETFD EWFQISGEND QQEVVQQLHK VLRPFLLRRL KSDVEKGLPP 420
  421 KKETILKVGM SQMQKQYYKA LLQKDLEVVN GGGERKRLLN IAMQLRKCCN HPYLFQGAEP 480
  481 GPPYTTGDHL VTNAGKMVLL DKLLPKLKDR DSRVLIFSQM TRLLDILEDY LMYRGYQYCR 540
  541 IDGNTGGDER DASIEAYNKP GSEKFVFLLS TRAGGLGINL ATADVVILYD SDWNPQVDLQ 600
  601 AQDRAHRIGQ KKEVQVFRFC TENAIEAKVI ERAYKKLALD ALVIQQGRLA EQKTVNKDEL 660
  661 LQMVRYGAEM VFSSKDSTIT DEDIDRIIAK GEEATAELDA KMKKFTEDAI QFKMDDSADF 720
  721 YDFDDDNKDE SKVDFKKIVS ENWNDPPKRE RKRNYSEVEY FKQTLRQGAP AKPKEPRIPR 780
  781 MPQLHDFQFF NIQRLTELYE KEVRYLMQAH QKTQMKDTIE VDEPEEVGDP LTAEEVEEKE 840
  841 LLLEEGFSTW SRRDFNAFIR ACEKYGRNDI KSIASEMEGK TEEEVERYAQ VFQVRYKELN 900
  901 DYDRIIKNIE RGEARISRKD EIMKAIGKKL DRYRNPWLEL KIQYGQNKGK LYNEECDRFM 960
  961 ICMVHKLGYG NWDELKAAFR TSPLFRFDWF VKSRTTQELA RRCDTLIRLI EKENQEFDER1020
 1021 ERQARKEKKL SKSATPSKRP SGRQANESPS SLLKKRKQLS MDDYGKRRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] PSI-BLAST 13.154902 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2
    2 View Details [142..724] PSI-BLAST 89.69897 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54
    3 View Details [725..1069] PSI-BLAST 43.39794 nucleosome recognition module of ISWI ATPase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle