YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30686014, gi|...

General Information:
Name(s) found: gi|42573391 [NCBI NR]
gi|30686014 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|42573391|ref|NP_974792.1| AtMYB9 (myb domain protein 9); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|30686014|ref|NP_197179.2| AtMYB9 (myb domain protein 9); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 336 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPCCDEN GLKKGPWTQE EDDKLIDHIQ KHGHGSWRAL PKQAGLNRCG KSCRLRWTNY  60
   61 LRPDIKRGNF TEEEEQTIIN LHSLLGNKWS SIAGNLPGRT DNEIKNYWNT HLRKKLLQMG 120
  121 IDPVTHRPRT DHLNVLAALP QLIAAANFNS LLNLNQNVQL DATTLAKAQL LHTMIQVLST 180
  181 NNNTTNPSFS SSTMQNSNTN LFGQASYLEN QNLFGQSQNF SHILEDENLM VKTQIIDNPL 240
  241 DSFSSPIQPG FQDDHNSLPL LVPASPEESK ETQRMIKNKD IVDYHHHDAS NPSSSNSTFT 300
  301 QDHHHPWCDT IDDGASDSFW KEIIEQTCSE PWPFPE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 38.522879 c-Myb, DNA-binding domain
    2 View Details [119..336] MSA 4.497997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle