YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|42567050

General Information:
Name(s) found: gi|42567050 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|42567050|ref|NP_194047.2| protein kinase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1262 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSDADASTS SSSIDIMPSA NIQNDVPEPS VHTSHRRTRK PAYLQDYYCH SVASLTIHDI  60
   61 SQFLSYEKVS PLYHSFLVCI AKAKEPSTYN EAKEFLVWCG AMDDEIGAME TTHTWEICTL 120
  121 PPNKKPIGCK WVYKIKYNSD GTIERYKARL VAKGYTQQEG IDFIETFSPV CKLTSVKLIL 180
  181 AISAIYNFTL HQLDISNAFL NGDLDEEIYM KLPPGYAARQ GDSLPPNAVC YLKKSIYGLK 240
  241 QASRQWFLKF SVTLIGFGFV QSHSDHTYFL KITATLFLCV LVYVDDIIIC SNNDAAVDEL 300
  301 KSQLKSCFKL RDLGPLKYFL GLEIARSAAG INICQRKYAL DLLDETGLLG CKPSSVPMDP 360
  361 SVTFSAHSGG DFVDAKAYRR LIGRLMYLQI TRLDISFAVN KLSQFSEAPR LAHQQAVMKI 420
  421 LHYIKGTVGQ GLFYSSQAEM QLQVFSDASF QSCKDTRRST NGYCMFLGTS LISWKSKKQQ 480
  481 VVSKSSAEAE YRALSFATDE MMWLAQFFRE LQLPLSKPTL LFCDNTAAIH IATNAVFHER 540
  541 TKHIESDCHS VRERSVYQAT LSYSFQAYDE QDGFTEYLSP ILRGTIMYIV SMFGLAGLEA 600
  601 LICFIFLFLF SFLTSFKASA QNPFYLNHDC PNRTTYSSNS TYSTNLKTLL SSFASRNASY 660
  661 STGFQNIRAG QTPDRVTGLF LCRGDLSPEV CSNCVAFSVN ESLTRCPNQR EAVFYYEECI 720
  721 LRYSHKNFLS TVTYEGELIM RNPNNISSIQ NQRDQFIDLV QSNMNQAANE AANSSRKFST 780
  781 IKTELTSLQT LYGLVQCTPD LARQDCFSCL TSSINRMMPL FRIGARQFWP SCNSRYELYA 840
  841 FYNETAIGTP SPPPLFPGST PPLTSPSIPG KSGNSTVLVV AIVVLAVLLF IALVGYCFLA 900
  901 QRTKKTFDTA SASEVGDDMA TADSLQLDYR TIQTATNDFA ESNKIGRGGF GEVYKGTFSN 960
  961 GKEVAVKRLS KNSRQGEAEF KTEVVVVAKL QHRNLVRLLG FSLQGEERIL VYEYMPNKSL1020
 1021 DCLLFDPTKQ TQLDWMQRYN IIGGIARGIL YLHQDSRLTI IHRDLKASNI LLDADINPKI1080
 1081 ADFGMARIFG LDQTQDNTSR IVGTYGYMAP EYAMHGQFSM KSDVYSFGVL VLEIISGRKN1140
 1141 SSFDESDGAQ DLLTHTWRLW TNRTALDLVD PLIANNCQNS EVVRCIHIGL LCVQEDPAKR1200
 1201 PTISTVFMML TSNTVTLPVP RQPGFFIQSS PVKDPTDSDQ STTTKSTPAS IDDELITDLY1260
 1261 PR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] deduced N/A No confident structure predictions are available.
    2 View Details [123..291] MSA 3.503967 View MSA. No confident structure predictions are available.
    3 View Details [292..389] deduced N/A No confident structure predictions are available.
    4 View Details [390..542] PSI-BLAST 4.30103 No description for 3c8xA was found.
    5 View Details [543..631] deduced N/A No confident structure predictions are available.
    6 View Details [632..732] Pfam 21.853872 No description for PF01657.9 was found. No confident structure predictions are available.
    7 View Details [733..868] Pfam 16.69897 No description for PF01657.9 was found. No confident structure predictions are available.
    8 View Details [869..1262] PSI-BLAST 75.522879 No description for 2qkwB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle