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View Structure Prediction Details

Protein: gi|42567050
Organism: Arabidopsis thaliana
Length: 1262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|42567050.

Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSDADASTS SSSIDIMPSA NIQNDVPEPS VHTSHRRTRK PAYLQDYYCH SVASLTIHDI  60
   61 SQFLSYEKVS PLYHSFLVCI AKAKEPSTYN EAKEFLVWCG AMDDEIGAME TTHTWEICTL 120
  121 PP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKKPIGCKWV YKIKYNSDGT IERYKARLVA KGYTQQEGID FIETFSPVCK LTSVKLILAI  60
   61 SAIYNFTLHQ LDISNAFLNG DLDEEIYMKL PPGYAARQGD SLPPNAVCYL KKSIYGLKQA 120
  121 SRQWFLKFSV TLIGFGFVQS HSDHTYFLKI TATLFLCVLV YVDDIIICS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [292-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNDAAVDELK SQLKSCFKLR DLGPLKYFLG LEIARSAAGI NICQRKYALD LLDETGLLGC  60
   61 KPSSVPMDPS VTFSAHSGGD FVDAKAYRRL IGRLMYLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [390-542]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITRLDISFAV NKLSQFSEAP RLAHQQAVMK ILHYIKGTVG QGLFYSSQAE MQLQVFSDAS  60
   61 FQSCKDTRRS TNGYCMFLGT SLISWKSKKQ QVVSKSSAEA EYRALSFATD EMMWLAQFFR 120
  121 ELQLPLSKPT LLFCDNTAAI HIATNAVFHE RTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 3c8xA
Description: No description for 3c8xA was found.

Predicted Domain #5
Region A:
Residues: [543-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HIESDCHSVR ERSVYQATLS YSFQAYDEQD GFTEYLSPIL RGTIMYIVSM FGLAGLEALI  60
   61 CFIFLFLFSF LTSFKASAQN PFYLNHDCP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [632-732]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRTTYSSNST YSTNLKTLLS SFASRNASYS TGFQNIRAGQ TPDRVTGLFL CRGDLSPEVC  60
   61 SNCVAFSVNE SLTRCPNQRE AVFYYEECIL RYSHKNFLST V

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.853872
Match: PF01657.9
Description: No description for PF01657.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [733-868]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TYEGELIMRN PNNISSIQNQ RDQFIDLVQS NMNQAANEAA NSSRKFSTIK TELTSLQTLY  60
   61 GLVQCTPDLA RQDCFSCLTS SINRMMPLFR IGARQFWPSC NSRYELYAFY NETAIGTPSP 120
  121 PPLFPGSTPP LTSPSI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.69897
Match: PF01657.9
Description: No description for PF01657.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [869-1262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGKSGNSTVL VVAIVVLAVL LFIALVGYCF LAQRTKKTFD TASASEVGDD MATADSLQLD  60
   61 YRTIQTATND FAESNKIGRG GFGEVYKGTF SNGKEVAVKR LSKNSRQGEA EFKTEVVVVA 120
  121 KLQHRNLVRL LGFSLQGEER ILVYEYMPNK SLDCLLFDPT KQTQLDWMQR YNIIGGIARG 180
  181 ILYLHQDSRL TIIHRDLKAS NILLDADINP KIADFGMARI FGLDQTQDNT SRIVGTYGYM 240
  241 APEYAMHGQF SMKSDVYSFG VLVLEIISGR KNSSFDESDG AQDLLTHTWR LWTNRTALDL 300
  301 VDPLIANNCQ NSEVVRCIHI GLLCVQEDPA KRPTISTVFM MLTSNTVTLP VPRQPGFFIQ 360
  361 SSPVKDPTDS DQSTTTKSTP ASIDDELITD LYPR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.522879
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle