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Protein Overview: gi|22328229

General Information:
Name(s) found: gi|22328229 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|22328229|ref|NP_680558.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEGVSLPL IHDLKKGDCS GRLKCVDHAC DSIVHPLHPI HSLRLLTKPG RDCDLCKREI  60
   61 KGLGYHCETC GFDVDLYCAM YPPPEECELH FHVDCVWHPT ELKHPLEVNH PYHALHPLKL 120
  121 LTARFPDYSD GKCRLCGSKI DDRLFYHCSS CNFTLGLCCV LRPPQPSLLN LKAHDHQLTL 180
  181 LPRLDSFTCN ACGLKGDRSP YICFQCGFMI HQDCLGPPRL ININRHDHRV VRTSVLGVVN 240
  241 SVCGVCRQKV DWTCGGFSCQ RCPDYVAHSK CATREDVWNG EELEGVPEEI EDIEPYVVID 300
  301 DNTIQHFSHK EHYLRLHDNG LLCDDNKRCR PCTHPICLQS FYGCMDCDFI LHKNCAGFLR 360
  361 MKWHVLHNER LTLVTTRVKT TELVYIQSVV SCVAFFLSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 6.0 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [113..309] PSI-BLAST 4.0 No description for 2i13A was found.
    3 View Details [310..399] FFAS03 1.15 Nuclear corepressor KAP-1 (TIF-1beta)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.148252783584283 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle