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Protein Overview: gi|30678677

General Information:
Name(s) found: gi|30678677 [NCBI NR]
Description(s) found:
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  • gi|30678677|ref|NP_191965.2| methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] [NCBI NR]
  • methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Methionine adenosyltransferase regulatory beta subunit-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | methionine adenosyltransferase regulatory beta subunit-related | chr4:240798-242267 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:240798-242267 REVERSE LENGTH=327 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Rossmann-fold NAD(P)-binding domain-containing protein OS=Arabidopsis thaliana GN=At4g00560 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4JHD7, NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana GN=At4g00560 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 327 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: metabolic process [IEA]
    extracellular polysaccharide biosynthetic process [IEA]
    Molecular Function: catalytic activity [IEA]
    binding [IEA]
    dTDP-4-dehydrorhamnose reductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKTKVLIV GGTGYLGQHL LQAFAGNYGG ECELYDVAFT HHSSPLPARL LDAFPHSPAF  60
   61 PVDLKSGLGL NSISQDFRQP DVVVNCAALS VPRACEQDPD SAMSINVPTS LVNWLSSFET 120
  121 NKTLLIHLST DQVYQGVKSF YKEEDETVAV NVYGKSKVAA ELLIKDKCQS FAILRSSIIF 180
  181 GPQTVSPLPK TLPIQWIDSS LKKGDTVDFF HDEFRCPIYV KDLVNITFKL IDRWVSDDKQ 240
  241 MRLVLNAGGP ERLSRVQMAQ MVAEVRGYDL SLIKHVSASS IDRGVVSPAD ISMDITKLIH 300
  301 TLELSPTSFK EGVRLTLDSE SHSHMLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..327] PSI-BLAST 62.522879 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methionine adenosyltransferase regulator activity
    		•  5.88466784940665 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.9367410227151 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.100470710829263 bayes_pls_golite062009
  • DNA binding
    		•  0.0870043837215047 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle