YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30678677
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKTKVLIV GGTGYLGQHL LQAFAGNYGG ECELYDVAFT HHSSPLPARL LDAFPHSPAF  60
   61 PVDLKSGLGL NSISQDFRQP DVVVNCAALS VPRACEQDPD SAMSINVPTS LVNWLSSFET 120
  121 NKTLLIHLST DQVYQGVKSF YKEEDETVAV NVYGKSKVAA ELLIKDKCQS FAILRSSIIF 180
  181 GPQTVSPLPK TLPIQWIDSS LKKGDTVDFF HDEFRCPIYV KDLVNITFKL IDRWVSDDKQ 240
  241 MRLVLNAGGP ERLSRVQMAQ MVAEVRGYDL SLIKHVSASS IDRGVVSPAD ISMDITKLIH 300
  301 TLELSPTSFK EGVRLTLDSE SHSHMLP

Type	Start	End	Confidence
Signal Peptide	1	25	0.56
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	327	0.99