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Protein Overview: gi|42572791, gi|...

General Information:
Name(s) found: gi|42572791 [NCBI NR]
gi|124301070 [NCBI NR]
Description(s) found:
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  • gi|42572791|ref|NP_974492.1| methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] [NCBI NR]
  • gi|124301070|gb|ABN04787.1| At4g00560 [Arabidopsis thaliana] [NCBI NR]
  • methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | methionine adenosyltransferase regulatory beta subunit-related | chr4:241194-242267 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:241194-242267 REVERSE LENGTH=253 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g00560 OS=Arabidopsis thaliana GN=At4g00560 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4JHD7, At4g00560 OS=Arabidopsis thaliana GN=At4g00560 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    cellular metabolic process [IEA]
    Molecular Function: coenzyme binding [IEA]
    catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKTKVLIV GGTGYLGQHL LQAFAGNYGG ECELYDVAFT HHSSPLPARL LDAFPHSPAF  60
   61 PVDLKSGLGL NSISQDFRQP DVVVNCAALS VPRACEQDPD SAMSINVPTS LVNWLSSFET 120
  121 NKTLLIHLST DQVYQGVKSF YKEEDETVAV NVYGKSKVAA ELLIKDKCQS FAILRSSIIF 180
  181 GPQTVSPLPK TLPIQWIDSS LKKGDTVDFF HDEFRCPIYV KDLVNITFKL IDRWVSGRFF 240
  241 FTEFHSLALH HCT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 50.0 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle