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Protein Overview: gi|57222174, gi|...

General Information:
Name(s) found: gi|57222174 [NCBI NR]
gi|42566882 [NCBI NR]
gi|111074498 [NCBI NR]
Description(s) found:
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  • gi|57222174|gb|AAW38994.1| At4g16670 [Arabidopsis thaliana] [NCBI NR]
  • gi|42566882|ref|NP_193400.2| phosphoinositide binding [Arabidopsis thaliana] [NCBI NR]
  • gi|111074498|gb|ABH04622.1| At4g16670 [Arabidopsis thaliana] [NCBI NR]
  • expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39969.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g16670 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39969.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546); contains InterPro domain Pleckstrin-like (InterPro:IPR001849) | chr4:9385348-9387592 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region | chr4:9385326-9387570 FORWARD LENGTH=429 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g16670 OS=Arabidopsis thaliana GN=At4g16670 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 429 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: signal transduction [ISS]
    Molecular Function: phosphoinositide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYDRTLNLI PYGLQGVREE EEIEEDDEES MTLSSVPENE TSECSSPPAT YPPIPPRPKT  60
   61 PREPMEFLCR SWSLSTSEIS LALSSQKSDK QLNKNPNISQ LADVTSLAPV APPPPLQTGK 120
  121 LASAVHARRT GTIGKWFHHR EFVGGKVSAV KKRDRVRVEK AHLHSAVSIA SLATAIAAVT 180
  181 ASGNQDGFAG SKMSSALASA SELLASHCLE LAELAGADHD RVVSAVRSAV DVRGPGDLLT 240
  241 LTAAAATALR GEAALRVRLP KEAKNSAAIS PCERVLPETH SCSSELDRTS TTDELISAKG 300
  301 VEESTGELMQ CTRNGVLRWK HVKVYINKKS QVIVEIKSKH VVGAFSMKSK GIVNDVCETV 360
  361 SGLQNGKDTE NTEEELYFGI GTGKGLTKFK CKSKADKQTW VDSIRNLLHR VTAVEVDTSL 420
  421 ETININDST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] deduced N/A No confident structure predictions are available.
    2 View Details [133..302] MSA 1.024983 View MSA. No confident structure predictions are available.
    3 View Details [303..429] Pfam 39.124939 No description for PF08458.1 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle