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Protein Overview: gi|56381977, gi|...

General Information:
Name(s) found: gi|56381977 [NCBI NR]
gi|15230808 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|56381977|gb|AAV85707.1| At3g25160 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230808|ref|NP_189152.1| ER lumen protein retaining receptor family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA][ISS]
    Biological Process: protein transport [ISS]
    protein retention in ER lumen [IEA]
    Molecular Function: ER retention sequence binding [IEA]
    receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRRGVSAV NVVFGWLRQQ SNKVKIALGI IISLILVVLL KFTVRNHNHF FIASELIHAA  60
   61 GILILIYKLT RQKTCSGLSL KSQEVTAIFL AVRLICSINM EGDIHTVLDF ATLVSTLWVI 120
  121 YMIRYKLKAS YIKSLDTCYN YYVLVPSAIL ALIINPSTSY SYFHRILWAF CVYTESVSVL 180
  181 PQLRLMQNAQ IIEPFTAHYV FALGIARFLA CAHWIIQVVE TRGHYLWLLG AGYFWFPVAL 240
  241 LAEIVQTFIL ADFCYYYVKS VMEGQLVLKM PV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] MSA 1.046993 View MSA. No confident structure predictions are available.
    2 View Details [100..272] MSA 6.052982 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle