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Protein Overview: gi|111074170, gi...

General Information:
Name(s) found: gi|42572513 [NCBI NR]
gi|111074170 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|42572513|ref|NP_974352.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|111074170|gb|ABH04458.1| At3g22260 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: cysteine-type peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDENHRNPFA NASTSARASG STSASSNSSF SSSVADTDDD QTIARILAED ESLRREGKLG  60
   61 KRLSHLDSIP HTPRVNREIP DINDATLDHE LLSGRLATYG LAELQMEGDG NCQFRALADQ 120
  121 LFRNADYHKH VRKHVVKQLK QQRKLYEEYV PMKYRHYTRK MKKHGEWGDH VTLQAAADRF 180
  181 EAKICLVTSF RDQSYIEILP HNKNPLREAW LSFWSEVHYN SLYANGVLAL PDVPTRKPRR 240
  241 KHWLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 29.69897 Structure of Otubain-2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.529663942126259 bayes_pls_golite062009
  • hydrolase activity
    		•  0.16837900182603 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle