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Protein Overview: gi|30686265, gi|...

General Information:
Name(s) found: gi|30686265 [NCBI NR]
gi|209529759 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30686265|ref|NP_850620.1| DXPS1; 1-deoxy-D-xylulose-5-phosphate synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|209529759|gb|ACI49774.1| At3g21500 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 629 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    terpenoid biosynthetic process [IEA][ISS]
    Molecular Function: 1-deoxy-D-xylulose-5-phosphate synthase activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSVFAFPS YINRNPSLKY LKPSSMSSTK YSKVRATTFS EKGEYYSNRP PTPLLDTINH  60
   61 PMHMKNLSIK ELKVLSDELR SDVIFNVSKT GGHLGSNLGV VELTVALHYI FNTPHDKILW 120
  121 DVGHQSYPHK ILTGRRGKMK TIRQTNGLSG YTKRRESEHD SFGTGHSSTT LSAGLGMAVG 180
  181 RDLKGMNNSV VSVIGDGAMT AGQAYEAMNN AGYLHSNMIV ILNDNKQVSL PTANLDGPTQ 240
  241 PVGALSCALS RLQSNCGMIR ETSSTLFEEL GFHYVGPVDG HNIDDLVSIL ETLKSTKTIG 300
  301 PVLIHVVTEK GRGYPYAERA DDKYHGVLKF DPETGKQFKN ISKTQSYTSC FVEALIAEAE 360
  361 ADKDIVAIHA AMGGGTMLNL FESRFPTRCF DVGIAEQHAV TFAAGLACEG LKPFCTIYSS 420
  421 FMQRAYDQVV HDVDLQKLPV RFAIDRAGLM GADGPTHCGA FDVTFMACLP NMIVMAPSDE 480
  481 AELFNMVATA AAIDDRPSCF RYHRGNGIGV SLPPGNKGVP LQIGRGRILR DGERVALLGY 540
  541 GSAVQRCLEA ASMLSERGLK ITVADARFCK PLDVALIRSL AKSHEVLITV EEGSIGGFGS 600
  601 HVVQFLALDG LLDGKLKVYR TWITNGSTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..629] PSI-BLAST 135.0 No description for 2o1sA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle