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View Structure Prediction Details

Protein: gi|30686265, gi|...
Organism: Arabidopsis thaliana
Length: 629 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30686265, gi|....

Description E-value Query
Range
Subject
Range
gi|51970458 - gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis thaliana]
556.0 [0..1] [629..1]

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Predicted Domain #1
Region A:
Residues: [1-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSVFAFPS YINRNPSLKY LKPSSMSSTK YSKVRATTFS EKGEYYSNRP PTPLLDTINH  60
   61 PMHMKNLSIK ELKVLSDELR SDVIFNVSKT GGHLGSNLGV VELTVALHYI FNTPHDKILW 120
  121 DVGHQSYPHK ILTGRRGKMK TIRQTNGLSG YTKRRESEHD SFGTGHSSTT LSAGLGMAVG 180
  181 RDLKGMNNSV VSVIGDGAMT AGQAYEAMNN AGYLHSNMIV ILNDNKQVSL PTANLDGPTQ 240
  241 PVGALSCALS RLQSNCGMIR ETSSTLFEEL GFHYVGPVDG HNIDDLVSIL ETLKSTKTIG 300
  301 PVLIHVVTEK GRGYPYAERA DDKYHGVLKF DPETGKQFKN ISKTQSYTSC FVEALIAEAE 360
  361 ADKDIVAIHA AMGGGTMLNL FESRFPTRCF DVGIAEQHAV TFAAGLACEG LKPFCTIYSS 420
  421 FMQRAYDQVV HDVDLQKLPV RFAIDRAGLM GADGPTHCGA FDVTFMACLP NMIVMAPSDE 480
  481 AELFNMVATA AAIDDRPSCF RYHRGNGIGV SLPPGNKGVP LQIGRGRILR DGERVALLGY 540
  541 GSAVQRCLEA ASMLSERGLK ITVADARFCK PLDVALIRSL AKSHEVLITV EEGSIGGFGS 600
  601 HVVQFLALDG LLDGKLKVYR TWITNGSTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 2o1sA
Description: No description for 2o1sA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle