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Protein Overview: EDL13_ARATH

General Information:
Name(s) found: EDL13_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana GN=At3g20460 PE=3 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    integral to membrane [IEA]
    Biological Process: transmembrane transport [IEA]
    transport [IEA]
    Molecular Function: carbohydrate transmembrane transporter activity [ISS]
    sugar:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDEPLLQKV KIQEDIESVP LLQKVKIQED IESVKGIRVN NDGEEDGPVT LILLFTTFTA  60
   61 LCGTFSYGTA AGFTSPAQTG IMAGLNLSLA EFSFFGAVLT IGGLVGAAMS GKLADVFGRR 120
  121 GALGVSNSFC MAGWLMIAFS QATWSLDIGR LFLGVAAGVA SYVVPVYIVE IAPKKVRGTF 180
  181 SAINSLVMCA SVAVTYLLGS VISWQKLALI STVPCVFEFV GLFFIPESPR WLSRNGRVKE 240
  241 SEVSLQRLRG NNTDITKEAA EIKKYMDNLQ EFKEDGFFDL FNPRYSRVVT VGIGLLVLQQ 300
  301 LGGLSGYTFY LSSIFKKSGF PNNVGVMMAS VVQSVTSVLG IVIVDKYGRR SLLTVATIMM 360
  361 CLGSLITGLS FLFQSYGLLE HYTPISTFMG VLVFLTSITI GIGGIPWVMI SEMTPINIKG 420
  421 SAGTLCNLTS WSSNWFVSYT FNFLFQWSSS GVFFIYTMIS GVGILFVMKM VPETRGRSLE 480
  481 EIQAAITR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 27.221849 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alcohol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  6.54968363274124 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  5.40344495119017 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.3746965264994 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.3746965264994 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  2.63293544825311 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.46605775041083 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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