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Protein Overview: gi|15230893, gi|...

General Information:
Name(s) found: gi|225194907 [NCBI NR]
gi|15230893 [NCBI NR]
Description(s) found:
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  • gi|225194907|gb|ACN81954.1| C-terminal domain phosphatase-like 5 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230893|ref|NP_188594.1| NLI interacting factor (NIF) family protein [Arabidopsis thaliana] [NCBI NR]
  • NLI interacting factor (NIF) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 NLI interacting factor (NIF) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 601 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVAKNLSPE RESKRQKKEP EIMEPSFPLL SPNNCGHWYI RYGFCIVCKS TVDKTIEGRV  60
   61 FDGLHLSSEA LALTKRLITK FSCLNMKKLH LVLDLDLTLI HSVRVPCLSE AEKYLIEEAG 120
  121 STTREDLWKM KVRGDPISIT IEHLVKLRPF LCEFLKEANE MFTMYVYTKG TRPYAEAILK 180
  181 LIDPKKLYFG HRVITRNESP HTKTLDMVLA DERGVVIVDD TRKAWPNNKS NLVLIGRYNY 240
  241 FRSQSRVLKP HSEEKTDESE NNGGLANVLK LLKGIHHKFF KVEEEVESQD VRLTMSVVEN 300
  301 FSSEPKAKRR KIEPTINESS SSLSSSSSCG HWYICHGICI GCKSTVKKSQ GRAFDYIFDG 360
  361 LQLSHEAVAL TKCFTTKLSC LNEKKLHLVL DLDHTLLHTV MVPSLSQAEK YLIEEAGSAT 420
  421 RDDLWKIKAV GDPMEFLTKL RPFLRDFLKE ANEFFTMYVY TKGSRVYAKQ VLELIDPKKL 480
  481 YFGDRVITKT ESPHMKTLDF VLAEERGVVI VDDTRNVWPD HKSNLVDISK YSYFRLKGQD 540
  541 SMPYSEEKTD ESESEGGLAN VLKLLKEVHQ RFFRVEEELE SKDVRSLLQE IDFELNVESV 600
  601 E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] PSI-BLAST 50.39794 No description for 2hhlA was found.
    2 View Details [264..371] deduced N/A No confident structure predictions are available.
    3 View Details [372..601] PSI-BLAST 48.09691 No description for 2q5eA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle