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Protein Overview: RH41_ARATH

General Information:
Name(s) found: RH41_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79295464|ref|NP_001030621.1| DEAD/DEAH box helicase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42572227|ref|NP_974208.1| DEAD/DEAH box helicase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|108861894|sp|Q3EBD3.1|RH41_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 41 [NCBI NR]
  • DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana GN=RH41 PE=2 SV=1 [Swiss-Prot]
  • DEAD/DEAH box helicase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DEAD/DEAH box helicase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DEAD/DEAH box helicase family protein | chr3:359143-360741 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DEAD-box ATP-dependent RNA helicase 41 [nr-271106-contam.fasta]
  • ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:359136-360734 FORWARD LENGTH=505 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 505 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA][ISS]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEEGCVPHN SDVVKQKSID QRAPLSGEPK CVICSRYGEY ICDETNDDVC SLECKQALLR  60
   61 RVDSARVFPA TDECFYVRDP GSSSHDAQLL RRKLDIHVQG QGSAVPPPVL TFTSCGLPPK 120
  121 LLLNLETAGY DFPTPIQMQA IPAALTGKSL LASADTGSGK TASFLVPIIS RCTTYHSEHP 180
  181 SDQRRNPLAM VLAPTRELCV QVEDQAKMLG KGLPFKTALV VGGDPMSGQL YRIQQGVELI 240
  241 IGTPGRVVDL LSKHTIELDN IMTFVLDEVD CMLQRGFRDQ VMQIFQALSQ PQVLLFSATI 300
  301 SREVEKVGGS LAKEIILVSI GNPNKPNKAV NQLAIWVDAK QKKQKLFDIL RSQNHFKPPA 360
  361 VVYVSSRVGA DLLANAITVV TGVKALSIHG EKPMKERRDV MGSFLGGEVP VLVSTGVLGR 420
  421 GVDLLVVRQV IVFDMPSTIK EYIHVIGRAS RMGEKGTAIV FVNEDDRNLF PDLVAALKSS 480
  481 GAAIPKELIN LTSREMHNKK RRVGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..65] FFAS03 4.39 No description for 2yqpA was found.
    2 View Details [66..505] PSI-BLAST 80.09691 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle