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Protein Overview: XPO1B_ARATH

General Information:
Name(s) found: XPO1B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30678764|ref|NP_566193.2| XPO1B; binding / protein transporter [Arabidopsis thaliana] [NCBI NR]
  • Protein EXPORTIN 1B OS=Arabidopsis thaliana GN=XPO1B PE=2 SV=1 [Swiss-Prot]
  • exportin 1, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Exportin 1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CRM1B, XPO1B | XPO1B (exportin 1B); protein transporter | chr3:708973-716886 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • XPO1B; protein transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: XPO1B, CRM1B | exportin 1B | chr3:708966-716879 FORWARD LENGTH=1076 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Exportin 1B OS=Arabidopsis thaliana GN=XPO1B PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1076 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEKLRDLS QPIDVVLLDA TVEAFYSTGS KEERASADNI LRDLKANPDT WLQVVHILQN  60
   61 TSSTHTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISDV IVQLSRDEAS FRTERLYVNK 120
  121 LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ 180
  181 KIKELKQSLN SEFQLIHELC LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI 240
  241 LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS 300
  301 TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC 360
  361 LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD GVKSEVTERQ KLYSDPMSKL 420
  421 RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM 480
  481 LSKLSKQLSG EEWAWNNLNT LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN 540
  541 KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK 600
  601 RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR 660
  661 LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT RVATSLGTFF LSQISLIFLD 720
  721 MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF 780
  781 VPPMMDQVLG DYARNVPDAR ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK 840
  841 NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL 900
  901 LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS 960
  961 LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT EVTQFVNGLY ESRNDVGRFK1020
 1021 DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..934] PSI-BLAST 45.0 Kap95p:RanGTP complex
    2 View Details [935..1076] PSI-BLAST 51.69897 Proteolytic fragment of CRM1 spanning six C-terminal HEAT repeats


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle