Protein Overview: RAP22_ARATH

General Information:
Name(s) found:	RAP22_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|18400321\|ref\|NP_566482.1\| RAP2.2; DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR] gi\|156633602\|sp\|Q9LUM4.2\|RAP22_ARATH RecName: Full=Ethylene-responsive transcription factor RAP2-2; AltName: Full=Protein RELATED TO APETALA2 2 [NCBI NR] Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=1 SV=2 [Swiss-Prot] AP2 domain-containing protein RAP2.2 (RAP2.2) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: RAP2.2 \| RAP2.2; DNA binding / transcription factor \| chr3:4737623-4739007 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] RAP2.2; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: RAP2.2 \| related to AP2 2 \| chr3:4737616-4739000 REVERSE LENGTH=379 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	379 amino acids
Gene Ontology:
Cellular Component:	nucleus [IC]
Biological Process:	response to hypoxia [IMP] regulation of gene expression [IEP] regulation of transcription, DNA-dependent [ISS]
Molecular Function:	DNA binding [TAS] transcription factor activity [ISS][TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK  60
   61 DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGIYL VGSAYAKKTV ESAEQAEKSS 120
  121 KRKRKNQYRG IRQRPWGKWA AEIRDPRKGS REWLGTFDTA EEAARAYDAA ARRIRGTKAK 180
  181 VNFPEEKNPS VVSQKRPSAK TNNLQKSVAK PNKSVTLVQQ PTHLSQQYCN NSFDNSFGDM 240
  241 SFMEEKPQMY NNQFGLTNSF DAGGNNGYQY FSSDQGSNSF DCSEFGWSDH GPKTPEISSM 300
  301 LVNNNEASFV EETNAAKKLK PNSDESDDLM AYLDNALWDT PLEVEAMLGA DAGAVTQEEE 360
  361 NPVELWSLDE INFMLEGDF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..61]	MSA	1.075995	View MSA. No confident structure predictions are available.
2	View Details	[62..112]	deduced	N/A	No confident structure predictions are available.
3	View Details	[113..176]	PSI-BLAST	23.0	GCC-box binding domain
4	View Details	[177..269]	deduced	N/A	No confident structure predictions are available.
5	View Details	[270..379]	MSA	1.116994	View MSA. No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: RAP22_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: