| Protein: | RAP22_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 379 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAP22_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..1] | [379..1] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK 60
61 D
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [62-112] |
1 11 21 31 41 51
| | | | | |
1 DSAFDCEDDD DVFVNVKPFV FTATTKPVAS AFVSTGIYLV GSAYAKKTVE S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-176] |
1 11 21 31 41 51
| | | | | |
1 AEQAEKSSKR KRKNQYRGIR QRPWGKWAAE IRDPRKGSRE WLGTFDTAEE AARAYDAAAR 60
61 RIRG
|
| Detection Method: | |
| Confidence: | 23.0 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [177-269] |
1 11 21 31 41 51
| | | | | |
1 TKAKVNFPEE KNPSVVSQKR PSAKTNNLQK SVAKPNKSVT LVQQPTHLSQ QYCNNSFDNS 60
61 FGDMSFMEEK PQMYNNQFGL TNSFDAGGNN GYQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [270-379] |
1 11 21 31 41 51
| | | | | |
1 YFSSDQGSNS FDCSEFGWSD HGPKTPEISS MLVNNNEASF VEETNAAKKL KPNSDESDDL 60
61 MAYLDNALWD TPLEVEAMLG ADAGAVTQEE ENPVELWSLD EINFMLEGDF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
