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Protein Overview: gi|30690804

General Information:
Name(s) found: gi|30690804 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30690804|ref|NP_850480.1| cation efflux family protein / metal tolerance protein, putative (MTPc1) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 468 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIIRFQILN PTRICRSTIY YMSCRYLPSS SSSSSPLRVS SSSSQKPSFD FSRRWHFGHP  60
   61 DHHQQYQKPG EEGEKIFRLG LTADIGLSVA KALTGYLCGS TAIIADAAHS VSDVVLSGVA 120
  121 LVSYRAANVP KDKEHPYGHG KFETLGALGI SAMLLATGSG IAWHALDLLS IALSAAPEVI 180
  181 HSGHHHGIDM NHPILALTVT IASISIKEGL YWITKRAGEK QGSGLMMANA WHHRSDAISS 240
  241 LVALVGVGGS ILGVNFLDPL AGLVVSTMIV NAGLKTGHQS ILELVDAAIP AQQLEPIRQT 300
  301 ILQVEGVKGC HRLRGRRAGS SLYLDVHIVV DPFSSVSVAH EVGEYVRRQI NLNHPEVSEV 360
  361 FIHIDPAFLQ FSCSTKDHDS ITKESNICQE IKHVEATVSD IFSSQLSEKL TIKRITPHLL 420
  421 HSKILLQIVV AMPSTMDVMI AAEHAEKEIL KAAPNVARVS IQLSLNSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..377] PSI-BLAST 59.154902 No description for 2qfiA was found.
    2 View Details [378..468] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  4.80415740186568 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.7111088918389 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.31582321262476 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  3.70168909103546 bayes_pls_golite062009
  • transporter activity
    		•  2.75060749825863 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.61478776136804 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.49211952065411 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.29284396884348 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.28901626534199 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.25549862417229 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.01332825422669 bayes_pls_golite062009
  • binding
    		•  0.80253540865533 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.4725448545847 bayes_pls_golite062009
  • cation channel activity
    		•  0.114605430567645 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.0866732167896778 bayes_pls_golite062009
  • protein binding
    		•  0.0557829197821959 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle