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Protein Overview: gi|42569956

General Information:
Name(s) found: gi|42569956 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|42569956|ref|NP_566058.2| ASK20 (ARABIDOPSIS SKP1-LIKE 20); protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEGDLAVMK PETMKSYIWL QTADGSIQQV EQEVAMFCPM ICQEVIQKGV GSSKNHAISL  60
   61 PQRVNPAMFS LILDYCRFHQ LPGRSNKERK TYDERFIRMD TKRLCELTSA ADSLQLKPLV 120
  121 DLTSRALARI IEGKNPEEIR EIFHLPDDLT EEEKLEPLKN SMDDPRIRLL NRLYAKKRKE 180
  181 LKERERLKNV EVEEHVDERS VDDLLSFING RDHKAVKMSK GKKKKKKKKD QKIVSSNNIH 240
  241 DKESHDLRSK QQCVEEIGSS MREVPNLLSA EDDISTPNAG SEDEDIDDEI DPAMRELLDR 300
  301 EVEDFAQRLN SNWVRSLGKE RRPVHFSING NGTTRRHTGQ SP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] PSI-BLAST 55.39794 Cyclin A/CDK2-associated p45, Skp1
    2 View Details [176..239] MSA 4.017996 View MSA. No confident structure predictions are available.
    3 View Details [240..342] MSA 1.003989 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle