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Protein Overview: PRNL2_ARATH

General Information:
Name(s) found: PRNL2_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Pirin-like protein At2g43120 OS=Arabidopsis thaliana GN=At2g43120 PE=2 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: calmodulin binding [IEP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAAINRANS LGGLFSFRFI RNIKSMSSST SQDFVSRPVI KKVFAKLQKE GDGAVVRRGI  60
   61 SRSEQKLLDP FLMLDEFSVS PPAGFPDHPH RGFETVTYVL EGGITHQDFK GHKGTIYAGD 120
  121 VQWMTAGRGI IHSEMPEEEV NKGLQLWINL SSNEKMIEPN YQELSHSDIP KAEQNGVEVK 180
  181 VIAGESMGIQ SPVYTRTPTM FLDFTLQPGA QIHQNVPESW NAFAYILESG EGGGVFSSSN 240
  241 SSPIPAHSVV VFGPGNDGVS VWNKSSSKQL RFVLIAGEPI GEPVVQYGPF VMNTQAEIDM 300
  301 TIEDYHYGKN GFEMAKYWRS Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..321] PSI-BLAST 93.045757 Crystal structure of human Pirin: a Bcl-3 and Nuclear factor I interacting protein and a cupin superfamily member

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.27132313313001 bayes_pls_golite062009
  • binding
    		•  2.06913005221547 bayes_pls_golite062009
  • DNA binding
    		•  1.65895851924037 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.63647328436787 bayes_pls_golite062009
  • transcription factor activity
    		•  1.01607426245072 bayes_pls_golite062009
  • protein binding
    		•  0.725572242652538 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle