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Protein Overview: gi|22325475

General Information:
Name(s) found: gi|22325475 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|22325475|ref|NP_178539.2| cation efflux family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 798 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDHHHHHHH QHRPNRLSVP QPTIGRTYPS FPYTPTPTPS KTRLSSSSSY RSIHGSKSSL  60
   61 SFLFLILFSL RSLYSLLPFL RSSPSFSLFP FSFLVSLLSF LFSLSFTIIS SFSPSKKDPF 120
  121 LLRLQNRSFS SISSLSSSQI KLLLAKSFLL AFVFLLRFQA LRYCGAAAMI LAELSGTVSA 180
  181 RVLFSDTGGI GVRSSKVRGF CVLFAGLLLL SISWDRVDCF PFSSSVESWG FWIYPKENCL 240
  241 RIWPLLLPFL SGFLGCYEKV SVNWNEIKQL DQKRVRLLSL FLTTVLLFPL AIWSFFFSGS 300
  301 GDDSVSFGNL GWPLANTVVF GVLLSENYND DKFSSSKKKD SEREFLVTFL CTIVLELFYF 360
  361 PELSLWGLLL CGLLLYIAVR ELESVYSDYQ EIGMESPESF STMFMKPIRH ILSEKKSRKI 420
  421 ALFLLINTAY MVVEFVAGFM SNSLGLISDA CHMLFDCAAL AIGLYASYIS RLPANHQYNY 480
  481 GRGRFEVLSG YVNAVFLVLV GALIVLESIE RILDPQEIST NSLLVVSVGG LLVNIVGLIF 540
  541 FHEEHHHAHG GSGCTHSHSH QSHSHKNEEH HQHSDSHKHE EHHQHSDSHK HEEHHEHDHH 600
  601 HHSHSHKHEE CNHNHDHEHQ SHSHNHEECN HNHDHHSDHQ PEKSEKKEHR HIDHNMEGIF 660
  661 LHVLADTMGS VGVVISTLLI KYKGWLVADP ASSIFISILI IASVIPLLRN SAEILLQRVP 720
  721 RAHRQDLKEA MRNILKTKGV CSIQRLHVWS FTNSDVVATL HLLVSADSDK TDTKLQVSRL 780
  781 LEDAGVKDWT LQVESVNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] MSA 1.012981 View MSA. No confident structure predictions are available.
    2 View Details [150..393] MSA 1.059979 View MSA. No confident structure predictions are available.
    3 View Details [394..542] FFAS03 3.2 No description for 2qfiA was found.
    4 View Details [543..798] PSI-BLAST 30.221849 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • transporter activity
    		•  0.0225298510244101 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.00888573638791978 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle