YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: DNJ13_ARATH

General Information:
Name(s) found: DNJ13_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • Chaperone protein dnaJ 13 OS=Arabidopsis thaliana GN=ATJ13 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to very low light intensity stimulus [IMP]
    [NOT]response to high light intensity [IMP]
    vegetative to reproductive phase transition of meristem [IMP]
    protein folding [ISS]
    Molecular Function: heat shock protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF  60
   61 QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA DEIKEELERI KRRNEEAKKM 120
  121 AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV 180
  181 ATAILRRQIS PVSSIEFVAS TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW 240
  241 TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS 300
  301 HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS 360
  361 AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL ENMEKTWGQV GEARARAEKA 420
  421 QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS 480
  481 DSGQLKLHEG VKKSGIMGFC DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] PSI-BLAST 26.69897 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [134..362] PSI-BLAST 35.39794 The crystal structure of Hsp40 Ydj1
    3 View Details [363..538] MSA 2.237958 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.823553393353769 bayes_pls_golite062009
  • protein binding
    		•  0.40147996507406 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.922056839584135 bayes_pls_golite062009
  • protein binding
    		•  0.37137044680558 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle