| Protein: | DNJ13_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 538 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNJ13_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
467.0 | [0..2] | [538..1] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF 60
61 QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA DEIKEELERI KRRNEEAKKM 120
121 AHFQPTGSIL FNL
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.823553393353769 | bayes_pls_golite062009 |
| protein binding | 0.40147996507406 | bayes_pls_golite062009 |
|
Region A: Residues: [134-362] |
1 11 21 31 41 51
| | | | | |
1 SVPHFLVGDG IMRGMVMASQ VQSQLSKDDA IAIGGNLAAN EKSGGGVATA ILRRQISPVS 60
61 SIEFVASTGL QSLIGVQTTR QLTIHSTATI NISKSLSDGS INLTNTWTRQ LSETSSGNIE 120
121 LALGMRSAIT VGWKKRDENV SAAGDFKIES GGLGASARYT RKLSSKSHGR IVGRIGSNAL 180
181 EIELGGGRQI SEFSTVRMMY TVGLKGIFWK VELHRGSQKL IVPILLSAH
|
| Detection Method: | |
| Confidence: | 35.39794 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.922056839584135 | bayes_pls_golite062009 |
| protein binding | 0.37137044680558 | bayes_pls_golite062009 |
|
Region A: Residues: [363-538] |
1 11 21 31 41 51
| | | | | |
1 LAPVFATGAF IVPTSLYFLL KKFVVKPYLL KREKQKALEN MEKTWGQVGE ARARAEKAQQ 60
61 LLQTVATRKK NRQVETDGLI VTKALYGDPK AIERRNEGVE GLDSGVIDVT VPMNFLVSDS 120
121 GQLKLHEGVK KSGIMGFCDP CPGQPKQLYI AYTYHSQPFE VIVGDYEELS IPQEGQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
